Re: [Freesurfer] Correcting pial surface with Flair sequence

2021-01-09 Thread Georgia Kapizioni
External Email - Use Caution Thank you for your help! I will try that. Best, Georgia > On 8 Jan 2021, at 6:22 PM, Georgia Kapizioni wrote: > > Let me rephrase: > > I am running an analysis with two groups, a patient group (n=23) and a > healthy control group (n=24). I have ac

Re: [Freesurfer] Correcting pial surface with Flair sequence

2021-01-08 Thread Glasser, Matthew
d.edu" Subject: Re: [Freesurfer] Correcting pial surface with Flair sequence External Email - Use Caution Let me rephrase: I am running an analysis with two groups, a patient group (n=23) and a healthy control group (n=24). I have accomplished 3DT1 recons for all participants. Now

Re: [Freesurfer] Correcting pial surface with Flair sequence

2021-01-08 Thread Georgia Kapizioni
External Email - Use Caution Let me rephrase: I am running an analysis with two groups, a patient group (n=23) and a healthy control group (n=24). I have accomplished 3DT1 recons for all participants. Now I want to correct pial surface using 3D Flair images. However, I have dif

Re: [Freesurfer] Correcting pial surface with Flair sequence

2021-01-07 Thread Glasser, Matthew
: "freesurfer@nmr.mgh.harvard.edu" Subject: Re: [Freesurfer] Correcting pial surface with Flair sequence External Email - Use Caution Thank you for your reply. However, my questions referred to whether a 3D Flair could also work for pial surface correction, or only 3D T2 flair i

Re: [Freesurfer] Correcting pial surface with Flair sequence

2021-01-07 Thread Georgia Kapizioni
External Email - Use Caution Thank you for your reply. However, my questions referred to whether a 3D Flair could also work for pial surface correction, or only 3D T2 flair is suitable and if it is ok for all participants not to have the same slice thickness on Flair, as I previ

Re: [Freesurfer] Correcting pial surface with Flair sequence

2021-01-05 Thread Glasser, Matthew
d.edu" Subject: [Freesurfer] Correcting pial surface with Flair sequence External Email - Use Caution Hello Freesurfer Developers, I am conducting a group analysis between a patients and a control group. I have accomplished recon-all individual analysis and I want to correct pial surface

[Freesurfer] Correcting pial surface with Flair sequence

2021-01-05 Thread Georgia Kapizioni
External Email - Use Caution Hello Freesurfer Developers, I am conducting a group analysis between a patients and a control group. I have accomplished recon-all individual analysis and I want to correct pial surface using 3D Flair. I would like to ask two specific things: 1. I