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Hello Freesurfer Experts,
I'm trying to create a ROI based on the peak from a paper. The peak on
MNI305 is X=22; Y=-71; Z=22
to use the mri_volsynth I transformed the CRS from MNI to rh.thickness with
the formula:
Vrh.thickness*inv(Trh.thickness)*R*T30
rh.thickness is a surface overlay, not a volume (which is needed for the
commands you are running). I'm a little confused by what you are trying
to do. Do you want an volume ROI or a surface ROI?
On 8/18/2020 8:13 PM, Mauricio Watanabe Ribeiro wrote:
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Hell
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Hi Douglas,
I want a ROI for measuring thickness. I have the peak difference on the
MNI305 and its area.
So I was trying to create a spherical volume starting at the peak and then
transform it to the surface.
I'm able to create the surface and see it on
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Actually I believe that I should just use the mri_vol2surf using the volume
I created.
But I don't know how to proceed. I tried
fslregister --s fsaverage --mov $SUBJECTS_DIR/fsaverage/mri/MNI305.cor.mgz
--reg ROI.dat
to have a register data to use at mr
First, determine which voxel (col, row, slice) you want your delta to be
in, then specify this with --delta-crsf col row slice 0
On 8/19/2020 9:57 PM, Mauricio Watanabe Ribeiro wrote:
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Actually I believe that I should just use the mri_vol2surf using the
v
