Re: [Freesurfer] DTI question

2015-02-12 Thread Douglas N Greve
:* Mittwoch, 11. Februar 2015 um 17:39 Uhr *Von:* Anastasia Yendiki ayend...@nmr.mgh.harvard.edu *An:* Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Betreff:* Re: [Freesurfer] DTI question Hi Tom - These are reasonable values for mean diffusivity (a.k.a. ADC). Only FA is normalized

Re: [Freesurfer] DTI question

2015-02-12 Thread ayendiki
*An:* Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Betreff:* Re: [Freesurfer] DTI question Hi Tom - These are reasonable values for mean diffusivity (a.k.a. ADC). Only FA is normalized to take values in the 0-1 range. a.y On Wed, 11 Feb 2015, Thomas Potrusil wrote: Dear FreeSurfers

[Freesurfer] DTI question

2015-02-11 Thread Thomas Potrusil
Dear FreeSurfers! A question concerning DTI analysis came up: I already run dt_recon on my dataset which works very well. I also used the output to extract FA-values of distinct ROIs - no Problem. Now I want to do the same for ADC but I only get values in my .stats files like 0.0007 or

Re: [Freesurfer] DTI question

2015-02-11 Thread Anastasia Yendiki
Hi Tom - These are reasonable values for mean diffusivity (a.k.a. ADC). Only FA is normalized to take values in the 0-1 range. a.y On Wed, 11 Feb 2015, Thomas Potrusil wrote: Dear FreeSurfers! A question concerning DTI analysis came up:   I already run dt_recon on my dataset which works

Re: [Freesurfer] DTI question

2015-02-11 Thread Thomas Potrusil
have any suggestions how I can get more decimal places on a .stats file? Thanks a lot, Tom Gesendet:Mittwoch, 11. Februar 2015 um 17:39 Uhr Von:Anastasia Yendiki ayend...@nmr.mgh.harvard.edu An:Freesurfer support list freesurfer@nmr.mgh.harvard.edu Betreff:Re: [Freesurfer] DTI question Hi Tom

Re: [Freesurfer] DTI question

2012-06-27 Thread Anastasia Yendiki
Not sure if this is the simplest way but mri_convert --split, followed by mri_concat, should do it. You'll also have to remove the respective gradient directions from the gradient file. Hope this helps, a.y On Wed, 27 Jun 2012, Drottar, Marie wrote: I have a DTI dataset with 10 b0 and

[Freesurfer] DTI question

2010-11-08 Thread Gabriel Go.Es.
Hello Freesurfers I'm starting to work with DTI data and I have a couple of questions; I have 2 identical DTI sequences for some subjects and I would like to work with them, does anyone knows if it's better to concatenate them or to make an average of them? And I'm wondering when I make