[Freesurfer] ERROR with mri_nu_correct function

2011-11-23 Thread Baris Demiral
Hi, I am trying to use mri_nu_correct.mni function in freesurfer on theXUbuntu system installed on the VirtualBox on a Windows 7 machine. I converted Siemens IMA into analyze format .img (with function;mri_convert -i input_file_name.IMA -ot analyze -ooutput_file_name.img), then when I called the fu

Re: [Freesurfer] ERROR with mri_nu_correct function

2011-11-27 Thread Bruce Fischl
hmmm, I'm not sure. It looks like an nu_correct problem, in which case you should probably ask the MNI people. Nick: any ideas? Bruce On Wed, 23 Nov 2011, Baris Demiral wrote: > Hi, > I am trying to use mri_nu_correct.mni function in freesurfer on > theXUbuntu system installed on the VirtualBox

Re: [Freesurfer] ERROR with mri_nu_correct function

2011-11-27 Thread Nick Schmansky
i dont have an ideas either. this is new territory for me as well, as its working on a siemans ima file converted to analyze. > hmmm, I'm not sure. It looks like an nu_correct problem, in which case > you should probably ask the MNI people. Nick: any ideas? > > Bruce > On Wed, 23 Nov > 2011, Bari