Re: [Freesurfer] Export .mgh files to volume

2009-08-26 Thread Douglas N Greve
You can use the identity, something like this: mri_surf2vol --identity subjectname --hemi lh --o vol.lh.thickness.nii --surfval lh.thickness --template ../mri/orig.mgz doug Holly Bridge wrote: > We have performed a GLM analysis on pial_lgi surface data between 2 > subject groups. We would like

[Freesurfer] Export .mgh files to volume

2009-08-26 Thread Holly Bridge
We have performed a GLM analysis on pial_lgi surface data between 2 subject groups. We would like to transform the sig.mgh file back from the average subject surface space to the average subject volume (brainmask.mgz). It would appear we should use mri_surf2vol, but are not clear what our v