: [Freesurfer] FW: The difference between wm.mgz and wm.seg.mgz
that sounds like a problem with the registration/transformation not the mask
itself. Why are you doing only translation? There will certainly be a rotation.
Have you tried using bbregister for this? It's what we use, and in general
that sounds like a problem with the registration/transformation not the
mask itself. Why are you doing only translation? There will certainly be a
rotation. Have you tried using bbregister for this? It's what we use, and
in general works really well (so well that the MJ ported it to FSL!)
chee
