Re: [Freesurfer] Feedback on Talairach QA and Q about segmentation in several atrophy

2008-04-30 Thread Bruce Fischl
Hi Damian, if the ventricles are that huge and there's that much atrophy it probably won't work Bruce On Wed, 30 Apr 2008, Damian Jenkins wrote: Using the -notal-check flag after recon-all to bypass Talairach allowed us to reclaim several images for inclusion in a study containing MS patien

[Freesurfer] Feedback on Talairach QA and Q about segmentation in several atrophy

2008-04-30 Thread Damian Jenkins
Using the -notal-check flag after recon-all to bypass Talairach allowed us to reclaim several images for inclusion in a study containing MS patients with severe atrophy. However, one image (which is nearly all ventricle!) is proving difficult to segment. The segmentation process parcels up bits