Re: [Freesurfer] FreeSurfer TrackVis Transforms

2016-08-15 Thread Anastasia Yendiki
Hi - Check out the dmri_trk2trk command. In your case, you'd need to pass it a transformation file from the registration between your diffusion and structural data, which you can compute with bbregister. Best, a.y On Mon, 15 Aug 2016, "김재명" wrote: Dear expert. Hi. I'm a newbie using

[Freesurfer] FreeSurfer TrackVis Transforms

2016-08-15 Thread 김재명
Dear expert.Hi. I'm a newbie using Freesurfer software, and I want to transform the data of .trk file which is from Trackvis tool. (https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferTrackVisTransforms)As there is an information for transforming trk file into the space of Freesurfer surface, I

[Freesurfer] FreeSurfer TrackVis Transforms

2012-07-27 Thread Trietsch, Rayna
Hi, I would like to follow the workflow for the FreeSurfer TrackVis Transforms (http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferTrackVisTransforms) but I'm not sure how to get started. The first step is to load the trk data and divide the trk coordinates from the file by the voxel_size in

Re: [Freesurfer] FreeSurfer TrackVis Transforms

2011-02-09 Thread pablo maturana
Dears expert, I would like to know how can i get the transformation from trackvis to a space Freesurfer?. I have here a link http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferTrackVisTransforms But i don't understand what mean this command, how I could load the file .dtk trk_verts_crs.xyz =

Re: [Freesurfer] FreeSurfer TrackVis Transforms

2011-02-09 Thread Ruopeng Wang
Do you mean .trk file? The format is described in detail here: http://trackvis.org/docs/?subsect=fileformat Ruopeng On 2/9/11 10:04 AM, pablo maturana wrote: Dears expert, I would like to know how can i get the transformation from trackvis to a space Freesurfer?. I have here a link