Re: [Freesurfer] Freesurfer Question regarding infant brain reconstructions

2008-07-22 Thread Bruce Fischl
Hi Katie, I don't have a lot of experience in that age range but... are you talking about the wm.mgz or the ?h.white in terms of accuracy? You should use the latter, as the wm.mgz is just an initial estimate that gets refined. If it's unmyelinated white matter control points are probably not t

[Freesurfer] Freesurfer Question regarding infant brain reconstructions

2008-07-22 Thread Katie Travis
Hello, I have some basic questions regarding some Freesurfer reconstructions that I've made on a set of infant brains (12-15month olds). Overall, the reconstructions have been successful. The exception being that the gray matter of the anterior temporal lobes are being underestimated,