Re: [Freesurfer] GLM_Fit Question

not sure what you're talking about On 5/16/17 2:55 PM, Mikael Novén wrote: Dear Freesurfer experts, I also have this problem and can’t seem to find the script. Would it be possible to get access to it? Thank you in advance, Mikael Novén ___ Fre

Re: [Freesurfer] GLM_Fit Question

Dear Freesurfer experts, I also have this problem and can't seem to find the script. Would it be possible to get access to it? Thank you in advance, Mikael Novén ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.e

Re: [Freesurfer] GLM_Fit Question

try now On 6/16/16 11:50 PM, Arkadiy Maksimovskiy wrote: Hi Freesurfers, I am having a similar problem with the FSGD file as the user indicated at this thread: https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg40599.html I am trying to access the script that Doug wrote in order

Re: [Freesurfer] GLM_Fit Question

Hi Freesurfers, I am having a similar problem with the FSGD file as the user indicated at this thread: https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg40599.html I am trying to access the script that Doug wrote in order to fix it, however, the link to download the script does not

Re: [Freesurfer] GLM_Fit Question

Thanks so much! That did the trick. Taylor Elrod ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addr

Re: [Freesurfer] GLM_Fit Question

r...@nmr.mgh.harvard.edu] > Sent: Tuesday, March 24, 2015 2:25 PM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] GLM_Fit Question > > The error is in the fsgd file. Can you send it to me? > > On 03/24/2015 05:16 PM, Elrod, Christian - SJHMC wrote: >> Dr. Gr

Re: [Freesurfer] GLM_Fit Question

-4494 From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve [gr...@nmr.mgh.harvard.edu] Sent: Tuesday, March 24, 2015 2:25 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] GLM_Fit Question The error

Re: [Freesurfer] GLM_Fit Question

edu > [freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve > [gr...@nmr.mgh.harvard.edu] > Sent: Monday, March 23, 2015 9:32 AM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] GLM_Fit Question > > The format of the fsgd file looks ok, but I susp

Re: [Freesurfer] GLM_Fit Question

-8674 From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve [gr...@nmr.mgh.harvard.edu] Sent: Monday, March 23, 2015 9:32 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] GLM_Fit Question The format of the

Re: [Freesurfer] GLM_Fit Question

The format of the fsgd file looks ok, but I suspect that there is a platform issue. How did you create it? Under windows? You can try something like cat your.fsgd | sed 's/\\r/\\n/g' > new.your.fsgd use new.your.fsgd and see if this fixes the problem. On 03/20/2015 02:48 PM, Elrod, Christian

[Freesurfer] GLM_Fit Question

Hello Freesurfer Group, I have a question regarding an error that I have been receiving when attempting to set up an analysis involving 4 groups of subjects with data coming from 2 separate scanning sites. The error is "ERROR: gdfReadV1: Found 7 variables, expected 1". This is how it appears

Re: [Freesurfer] glm_fit question...

Cameron Ellis wrote: Hi all, Is it necessary to include a value in your contrast matrix for every class and variable in your fsgd file? Yes, you have to have a value in the contrast matrix for each regressor in the design matrix. It seems that this is the case. My understanding is that i

[Freesurfer] glm_fit question...

Hi all, Is it necessary to include a value in your contrast matrix for every class and variable in your fsgd file? It seems that this is the case. My understanding is that if you weight a variable 0 then it is automatically controlled for. So if am required to weight a variabe in the contrast matr