Dear Kimi,
When you process the scans longitudinally with FreeSurfer, the file base-tps
should be created in the subject directory of the template. Isn’t this the case?
Cheers,
/Eugenio
Juan Eugenio Iglesias
http://www.jeiglesias.com
On 19 Sep 2022, at 01:02, Raikkonen Kimi
mailto:akdaus
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Dear FreeSurfer,
Hi, I was trying to run longitudinal analysis of the hippocampus and amygdala
segmentation pipeline after running the main FreeSurfer longitudinal pipeline.
I ran
segmentHA_T1_long.sh 101_MRI1.long.101_template
segmentHA_T1_long.sh
