Re: [Freesurfer] Hippocampal subfield segmentation with T1 and T2

2018-01-18 Thread Iglesias Gonzalez, Eugenio
: Thursday, January 18, 2018 10:59:45 PM To: Freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Hippocampal subfield segmentation with T1 and T2 Hi all, I've been trying to run the hippocampal subfield segmentation with T1 and T2 images, and haven't had much luck. I had previously run re

[Freesurfer] Hippocampal subfield segmentation with T1 and T2

2018-01-18 Thread Cassandra Wannan
Hi all, I've been trying to run the hippocampal subfield segmentation with T1 and T2 images, and haven't had much luck. I had previously run recon-all on all my scans in v5.3, but testing on one subject I re-ran recon-all with the additional T2 scan, and that seems to have run fine. However, when