Re: [Freesurfer] Hippocampal subfilelds label

2011-08-31 Thread Koen Van Leemput
Hi Shashwath, The label hippocampus was used in the tail of the hippocampus, where the manual labelers (who labeled the data our automated method is trained on) stopped trying to distinguish between the different subfields. If you want to compute the volume of the whole hippocampus, then you

Re: [Freesurfer] Hippocampal subfilelds label

2011-08-31 Thread Shashwath Meda
Thanks, Koen. The issue is in my preliminary study this is the only subfield that shows a significant difference. So do you think it would still be worth reporting? On Wed, Aug 31, 2011 at 1:41 AM, Koen Van Leemput k...@nmr.mgh.harvard.eduwrote: Hi Shashwath, The label hippocampus was used in

[Freesurfer] Hippocampal subfilelds label

2011-08-30 Thread Shashwath Meda
Hi Koen - I am looking at some hippocampal subfield measures on 3T and 7T and noticed that there is a label called hippocampus from your recent publications it was unclear what this label exactly meant? Is this a useful subfield measure to be considered for further analysis? What does this