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Hi,
I experienced issues with segmentation (exclusion of large portion of
cerebellum) and so used SynthSeg in Matlab (as the built-in mri_synthseg in
freesurfer wasn’t working on my computer) to create the segmentation. Does
anyone know how to import
h the
segmentation you want and then write it out
Cheers
Bruce
-Original Message-
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Haley O Higginbotham
Sent: Friday, August 25, 2023 11:06 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Import Matlab SynthSeg labels
, August 26, 2023 at 12:22 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Import Matlab SynthSeg labels to FS
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Hi Haley
I'm not sure I understand how you ran SynthSeg in matlab, but we supply .m
files for reading/writing volumes (MRIread and MRI
