Re: [Freesurfer] Information about argument -erode in command mri_extract_label

2019-02-19 Thread Bruce Fischl
Hi Viktor it is a 3D erosion, and a cubic 3x3x3 structuring element. cheers Bruce On Tue, 19 Feb 2019, Viktor Domazetoski wrote: External Email - Use Caution Dear FreeSurfer experts, I would like to enquire about the command mri_extract_label. More specifically I am looki

[Freesurfer] Information about argument -erode in command mri_extract_label

2019-02-19 Thread Viktor Domazetoski
External Email - Use Caution Dear FreeSurfer experts, I would like to enquire about the command mri_extract_label. More specifically I am looking for information about the -erode argument. Therefore I have a few questions: 1. Is a 3D erosion of the entire brain or a 2D slice