Re: [Freesurfer] Log transformation vertex-wise

2020-09-09 Thread Jose Graterol
External Email - Use Caution Yes, that worked. Thank you. Douglas N. Greve schrieb am Di., 8. Sep. 2020, 17:04: > you just want to compute the log of the voxel values in a volume? You can > use fscalc > > On 9/8/2020 6:30 AM, Jose Graterol wrote: > > External Email - Use

Re: [Freesurfer] Log transformation vertex-wise

2020-09-08 Thread Douglas N. Greve
you just want to compute the log of the voxel values in a volume? You can use fscalc On 9/8/2020 6:30 AM, Jose Graterol wrote: External Email - Use Caution Hey Tim, thanks for the quick response and for the script. I will try that. Best, José On Tue, Sep 8, 2020 at 11:07 AM Tim S

Re: [Freesurfer] Log transformation vertex-wise

2020-09-08 Thread Jose Graterol
External Email - Use Caution Hey Tim, thanks for the quick response and for the script. I will try that. Best, José On Tue, Sep 8, 2020 at 11:07 AM Tim Schäfer wrote: > External Email - Use Caution > > Hi José, > > most likely there is an easier way to do this with s

Re: [Freesurfer] Log transformation vertex-wise

2020-09-08 Thread Tim Schäfer
External Email - Use Caution Hi José, most likely there is an easier way to do this with some FreeSurfer command that others can suggest (and I am not aware of), but I would do it in R with this script: https://gist.github.com/dfsp-spirit/ccdc8c5efb0cff2ba5b139190bbfb397 Best,

[Freesurfer] Log transformation vertex-wise

2020-09-08 Thread Jose Graterol
External Email - Use Caution Hello FreeSurfer Developers, I have a technical question for which I have not yet found the answer. First, I am running FreeSurfer stable-pub-v6.0.0-2beb96c on CentOS 7. Now to the question: is there a way to apply, say, a logarithmic transformation v