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Subject: Re: [Freesurfer] Longitudinal hippocampal subfield registered to base
Dear Amanda
The longitudinally processed time points are already in base space. Those
transforms you used map base to the original, cross sectionally processed
volumes.
Regarding individual subfields:
oun...@nmr.mgh.harvard.edu> on behalf of Worker, Amanda
<amanda.wor...@kcl.ac.uk>
Sent: Wednesday, March 1, 2017 12:14:50 PM
To: Freesurfer support list
Subject: [Freesurfer] Longitudinal hippocampal subfield registered to base
Hi All,
I have applied the hippocampal subfield segmentation algor
Hi All,
I have applied the hippocampal subfield segmentation algorithm to each of my
time points that have been longitudinally processed. I am now trying to
register these back into base space using:
mri_convert -T BASE/mri/transforms/TP_to_base.lta -rl BASE/mri/norm.mgz -rt
nearest
