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Dear FreeSurfer Experts,
I have some baseline and follow-up MRI scans that I would like to process
through the longitudinal stream.
Some of the baseline images were originally in Analyze format (LAS orientation)
and were converted into nifti (keepin
Hi Elena,
FreeSurfer put inputs in RAS coordinates (during the conform step at
the very beginning), so it will take care of this. But only if the
correct information is available from the input image header. If that
header was corrupted earlier, it is impossilbe to know what coordinates
the input