Re: [Freesurfer] MNIX/Y/Z coordinates in mri_glmfit-sim .summary file

2015-03-16 Thread Douglas N Greve
They are MNI305 coordinates. When we mention "Talairach" coordinates, it refers to mni305 coordinates that have been transformed according to some work done by Matthew Brett. It used to be documented here http://www.mrc-cbu.cam.ac.uk/Imaging/mnispace.html, but it is not in that location anymor

[Freesurfer] MNIX/Y/Z coordinates in mri_glmfit-sim .summary file

2015-03-15 Thread Nicola Toschi
Hi list, I noticed that, while the wiki refers to Talairach coordinates named TalX/Y/Z (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysisClusterSummary), the header in my .summary files reads something like: # ClusterNo Max VtxMax Size(mm^2) MNIX MNIY MNIZCWP C