You mean you want to display your group volume-based results on the
average surface? That's unusual, but it can be done. You need to create
a registration file between your group average and the standard space
templage, eg, something like:
fslregister --mov $FSLDIR/etc/standard/avg152T1.nii.
we haven't distributed it yet, but it would just take the form of label
maps with associated probabilities in fsaverage space. You would need to
do our surface-based averaging for it to apply. We haven't gotten the
auditory cortex data yet, but probably could if you were interested.
On Tue, 1
Bruce,
it's auditory cortex I am interested in. If there is a tutorial or explanation
somewhere, could you please point me to it. Is this already available in FS?
Thanks
Martin
On Tuesday 13 November 2007 14:38:52 you wrote:
> what areas specifically? We have analyzed their data and have a pape
what areas specifically? We have analyzed their data and have a paper
accepted at Cerebral Cortex on the surface-based equivalent atlas, which
is quite a bit more accurate than the linear or nonlinear volumetric
ones, and are getting ready to release it for general use.
cheers,
Bruce
On Tue, 1
Thanks for reply, Bruce
On Tuesday 13 November 2007 13:43:03 you wrote:
> Hi Martin,
> I'll leave a) for Doug (and yes it is doable). For b) we'll need more
> info. What kind of atlas? Is it in some common space?
It is a Julich probabilistic histological atlas, which is a part of the latest
FSL.
Hi Martin,
I'll leave a) for Doug (and yes it is doable). For b) we'll need more
info. What kind of atlas? Is it in some common space?
cheers,
Bruce
On Tue, 13 Nov 2007,
Martin Kavec wrote:
Hi,
I can not find my way to map the results of the FSL fMRI group analysis
(FLAME1+2) from differen
Hi,
I can not find my way to map the results of the FSL fMRI group analysis
(FLAME1+2) from different subjects on their average surface. Here is in more
details what I have done:
1. fMRI analysis of each subject in FSL
2. group analysis (FLAME1+2) in FSL
3. cortical reconstruction of each subje
