[Freesurfer] Mapping the labels onto the aparc atlas

External Email - Use Caution Hi Freesurfer devs, We have used mri_aparc2aseg to map the Stanford mpm/vpnl labels unto the gray matter ribbon. We notice that when analyzing the resulting mpm.vpnl+aseg.mgz that the regions/voxels of the mpm.vpnl+aseg.mgz stretch out the correspond

Re: [Freesurfer] Mapping the labels onto the aparc atlas

I'm not sure what you are saying. Are you saying that the annot/surf looks right but the seg in the volume looks wrong or that they both look wrong? On 10/31/2022 2:58 PM, Zeng, Victor (BIDMC - Keshavan - Psychiatry) wrote: External Email - Use Caution Hi Freesurfer devs, We have us