Re: [Freesurfer] Merging .annot files using mris_label2annot puts labels in the wrong place

2013-02-25 Thread Douglas N Greve
Hi Chris, in the color table file, do you have an "unkown" entryas the first entry? There should be one or else use --no-unknown. doug On 02/16/2013 11:07 PM, Chris McNorgan wrote: > Hi all, > > I posted this back in January, and got a direct email reply from > someone on the mailing list, who

Re: [Freesurfer] Merging .annot files using mris_label2annot puts labels in the wrong place

2013-02-17 Thread Bruce Fischl
Hi Chris this is probably a question for Doug, which means it will have to wait as he's away. Can you repost in a week or so if you haven't gotten a response? thanks Bruce On Sat, 16 Feb 2013, Chris McNorgan wrote: > Hi all, > > I posted this back in January, and got a direct email reply from

[Freesurfer] Merging .annot files using mris_label2annot puts labels in the wrong place

2013-02-16 Thread Chris McNorgan
Hi all, I posted this back in January, and got a direct email reply from someone on the mailing list, who gave me a helpful tip, but it doesn't seem to be working out quite right. The problem: I have 3 .annot files per hemisphere, each based on the ?h.aparc.