Re: [Freesurfer] Missing 'brainstemSsLabels.v10.mgz' file

2021-03-25 Thread Douglas N. Greve
Can you send the recon-all.log file? On 3/23/2021 3:31 PM, Taylor, Lisa Marie wrote: External Email - Use Caution Hi, This is the first time I have encountered this problem.  I have a participant that has been through recon all, but when trying to create PET masks, the error that

Re: [Freesurfer] Missing 'brainstemSsLabels.v10.mgz' file

2021-03-24 Thread Iglesias Gonzalez, Juan E.
h 23, 2021 12:56 PM To: Freesurfer support list Subject: Re: [Freesurfer] Missing 'brainstemSsLabels.v10.mgz' file Dear Lisa, Maybe the brainstem module failed for some reason? If you send us the log files, we can take a look. Cheers, /Eugenio Juan Eugenio Iglesias Senior research fe

Re: [Freesurfer] Missing 'brainstemSsLabels.v10.mgz' file

2021-03-23 Thread Iglesias Gonzalez, Juan E.
ot; Reply-To: Freesurfer support list Date: Tuesday, March 23, 2021 at 15:32 To: "freesurfer@nmr.mgh.harvard.edu" Subject: [Freesurfer] Missing 'brainstemSsLabels.v10.mgz' file External Email - Use Caution Hi, This is the first time I have encountered this problem. I have a partic

[Freesurfer] Missing 'brainstemSsLabels.v10.mgz' file

2021-03-23 Thread Taylor, Lisa Marie
External Email - Use Caution Hi, This is the first time I have encountered this problem. I have a participant that has been through recon all, but when trying to create PET masks, the error that comes up is that the 'brainstemSsLabels.v10.mgz' file is missing in the MRI