Re: [Freesurfer] Own ROI for cortical thickness measurements

2016-12-16 Thread Bruce Fischl
Hi Andreas what to you mean "I already tryed the mri_vol2surf and mri_vol2roi, unfortunately without successs." In what way didn't they work? cheers Bruce On Fri, 16 Dec 2016, andi...@gmx.net wrote: Dear Freesurfer-experts,   I want to create my own ROI for purposes of cortical thickness m

[Freesurfer] Own ROI for cortical thickness measurements

2016-12-16 Thread andi...@gmx.net
Dear Freesurfer-experts, I want to create my own ROI for purposes of cortical thickness measurements in Freesurfer. As input, I have a binary_volume_mask.mgz. But I'm lacking to get this mask as a label or volume into the FS structure. I already tryed the mri_vol2surf and mri_vol2roi, unfortunate