[Freesurfer] Pial extension into cerebellum

2012-01-17 Thread Mahinda Yogarajah
Dear Freesurfer Experts, I have read the advice on the wiki regarding what to do when pial surfaces extend into the cerebellum. I had a few questions to clairfy things: 1) If I have made other (non-cerebellar) edits to the brainmask.mgz, and added control points can I simply do cp brainmask.mgz

[Freesurfer] Pial extension into cerebellum

2012-01-19 Thread Mahinda Yogarajah
Apologies for the repost - this may have got lost in the mail blackout ... Dear Freesurfer Experts, I have read the advice on the wiki regarding what to do when pial surfaces extend into the cerebellum. I had a few questions to clairfy things: 1) If I have made other (non-cerebellar) edits to t