Don't know. Looks like it is some kind of internal matlab error. Did you
recently change versions?
btw We are no longer supporting lGI at this time.
On 9/3/2019 12:11 PM, Avi Gharehgazlou wrote:
External Email - Use Caution
Hi,
I have ran the lGI flag many times in the past. However, n
External Email - Use Caution
Hi,
I have ran the lGI flag many times in the past. However, now that I am
trying to run the flag on a new group of participants I get the below
error. Will you please tell me how I can fix this?
Thanks so much,
Avi
New invocation of recon-all
Albert,
If I'm reading this correctly, it means it works for you now, as the
output says that it produced lh.pial-outer. Is this correct? I dont
know why it was not working for you.
Nick
On Fri, 2009-08-28 at 14:52 +0800, leemon albert wrote:
> P.S.:
> >> huigu...@hhg-linux:/mnt/freesurfer/sub
P.S.:
>> huigu...@hhg-linux:/mnt/freesurfer/subjects/dinghai_4/surf$ cat
/tmp/mos_25794_.m|/usr/local/bin/matlab -display iconic -nojvm -nosplash
Warning: Unable to open display iconic, MATLAB is starting without a
display.
You will not be able to display graphics on the screen.
Hi,everyone.
The debug output is followed. I think the problem is "$MLF | ${MATLAB}
-display iconic -nojvm -nosplash"
cat /tmp/mos_12142_.m /usr/local/bin/matlab -display iconic -nojvm -nosplash
this command is not implemented rightly. However, when I run only the matlab
cmd, it's seem to be right.
Albert,
It appears to be failing when the mris_compute_lgi script first attempts
a call to matlab. To debug, try this:
cd $SUBJECTS_DIR/dinghai_4/surf
mris_compute_lgi --i lh.pial --debug
and follow the output to trace where it is failing. notice that
mris_compute_lgi creates a temporary .m f
Dear all,
I am trying to compute the local gyrification index but unfortunately
encounter the problem below. Matlab Version ( R2007a) and also the Image
Processing Toolbox are installed on my computer (Ubuntu 9.04,32-bit).
I think the matlab isn't rightly called by the script. But the
"make_out
Dear all,
It looks like I have found a workaround for the problem that I encountered when
calculating the local gyrification index. I am not sure how common my problem
is, but as the solution might interest some other people aswell I decided to
post it here.
The problem was that in my case Mat
Dear all,
I am trying to compute the local gyrification index but unfortunately encounter
the problem below. Matlab Version (7.7.0.471 - R2008b) and also the Image
Processing Toolbox are installed on my computer.
As I understand 'make_outer_surface' does not find
'tmp-mris_compute_lgi-lh.pial
