Re: [Freesurfer] Problem with registration (PetSurfer)

2020-02-14 Thread Douglas N. Greve
Sorry, can you include  the previous emails, otherwise I don't know what the context is On 2/12/2020 3:06 AM, Marina Fernández wrote: External Email - Use Caution The error was shown after running tkregisterfv. Marina. ___ Freesurfer

Re: [Freesurfer] Problem with registration (PetSurfer)

2020-02-12 Thread Marina Fernández
External Email - Use Caution Doug, the full terminal output from the terminal after running tkregisterfv was: freeview -transform-volume -viewport cor -v /usr/local/freesurfer/subjects/s_001/mri/orig.mgz:visible=0:name=orig.mgz(targ)

Re: [Freesurfer] Problem with registration (PetSurfer)

2020-02-12 Thread Marina Fernández
External Email - Use Caution The error was shown after running tkregisterfv. Marina. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Re: [Freesurfer] Problem with registration (PetSurfer)

2020-02-11 Thread Douglas N. Greve
what command does it happen with? Please send the full terminal output from the command On 2/11/20 1:01 PM, Marina Fernández wrote: > > External Email - Use Caution > > Dear experts, I am following PetSurfer steps > (https://surfer.nmr.mgh.harvard.edu/fswiki/PetSurfer). Something was >

[Freesurfer] Problem with registration (PetSurfer)

2020-02-11 Thread Marina Fernández
External Email - Use Caution Dear experts, I am following PetSurfer steps (https://surfer.nmr.mgh.harvard.edu/fswiki/PetSurfer). Something was wrong using mri_coreg function because when I checked the registration with tkregisterfv this error was shown in the terminal: