Re: [Freesurfer] Problems with freesurfer 7.1.0 and MacOS

2020-06-02 Thread Angela Favaro
>>> Andrew >>> >>> >>> From: >> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of Angela Favaro >>> mailto:angela.fav...@unipd.it>> >>> Reply-To: FS Help >> <mailto:freesurfer@nmr.mgh.harvard.edu>> >>

Re: [Freesurfer] Problems with freesurfer 7.1.0

2020-05-30 Thread Angela Favaro
esurfer-boun...@nmr.mgh.harvard.edu>> on behalf of Angela Favaro >> mailto:angela.fav...@unipd.it>> >> Reply-To: FS Help > <mailto:freesurfer@nmr.mgh.harvard.edu>> >> Date: Wednesday, May 27, 2020 at 4:27 PM >> To: FS Help > <mailto:f

Re: [Freesurfer] Problems with freesurfer 7.1.0

2020-05-28 Thread Angela Favaro
r/freesurfer/dev/scripts/rca-long-tp-init> > -o rca-long-tp-init > sudo chmod +x rca-long-tp-init > > Best > Andrew > > > From: on behalf of Angela Favaro > > Reply-To: FS Help > Date: Wednesday, May 27, 2020 at 4:27 PM > To: FS Help > Subje

Re: [Freesurfer] Problems with freesurfer 7.1.0

2020-05-28 Thread Hoopes, Andrew
/freesurfer/freesurfer/dev/scripts/rca-long-tp-init -o rca-long-tp-init sudo chmod +x rca-long-tp-init Best Andrew From: on behalf of Angela Favaro Reply-To: FS Help Date: Wednesday, May 27, 2020 at 4:27 PM To: FS Help Subject: [Freesurfer] Problems with freesurfer 7.1.0 External Email

[Freesurfer] Problems with freesurfer 7.1.0

2020-05-27 Thread Angela Favaro
External Email - Use Caution Dear Freesurfer experts, I am re-analyzing my longitudinal dataset using Freesurfer 7.1.0 with a McOS Catalina. I found 2 main problems 1. About a 10% of cases failed at the segmentation stage during the recon-all processing (I uploaded one of these