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Dea FreeSurfer experts,
I’m writing in order to ask how to map on a surface data from a volumetric MTR
image.
I have volumetric Magnetization Transfer Ratio data co-registered to the
subject native space of a subject (as produced by recon-all on a T
You are on the right track. First, you need a registration matrix. You
can get this with
bbregister --mov mtr.nii.gz --reg reg.lta --s subject --t2
The above command assumes that GM is brighter than WM in MTR. If this is
not the case, then use --t1
View your registration with
tkregisterfv --mov m
