Re: [Freesurfer] QDEC Longitudinal Analysis: Missing spc option from dropdown menu

2019-03-18 Thread Martin Reuter
Hi Arsenije, the file name should be (with a starting “.” and no file extension): $SUBJECTS_DIR/qdec/.Qdecrc Best, Martin > On 22. Feb 2019, at 00:22, Arsenije Subotic > wrote: > > Dear Freesurfer experts, > > I am having issues choosing the spc option for my QDEC two stage longitudinal

Re: [Freesurfer] QDEC Longitudinal Analysis: Missing spc option from dropdown menu

2019-02-22 Thread Greve, Douglas N.,Ph.D.
qdec is not really being supported anymore. It is better if you use the command line stream On 2/21/19 6:22 PM, Arsenije Subotic wrote: External Email - Use Caution Dear Freesurfer experts, I am having issues choosing the spc option for my QDEC two stage longitudinal analysis as it

[Freesurfer] QDEC Longitudinal Analysis: Missing spc option from dropdown menu

2019-02-21 Thread Arsenije Subotic
External Email - Use Caution Dear Freesurfer experts, I am having issues choosing the spc option for my QDEC two stage longitudinal analysis as it is not there. The spc files are all present in my participants files and the Qdecrc file is in the qdec subdirectory containing the

Re: [Freesurfer] QDEC longitudinal analysis

2015-03-03 Thread Martin Reuter
Hi Carolina, the command long_qdec_table reduces your longitudinal table (the one with the second column 'fsid-base') into cross sectional format with one line per subject. That's all it does. In order to create the within-subject rate and percent change maps, you need to run long_mris_slopes f

[Freesurfer] QDEC longitudinal analysis

2015-03-02 Thread carolina.mr
Hello Freesurfers,   I am trying to run QDEC for a longitudinal analysis.   I've run the command  "long_qdec_table --qdec ./qdec/long.qdec.table.dat --cross --out ./qdec/cross.qdec.table.dat" to adjust my qdec table to the right format for QDEC (with only one line / subject). I've also created the