recon-all would be:
recon-all -i MPRAGE.nii.gz -s Diff01 -sd -all
that will name your subject Diff01 and run recon-all on it. Depending on
your hardware it will take 10-20 hours
cheers
Bruce
On Tue, 5 Feb 2013, std...@virgilio.it wrote:
No, I 'm sorry. I try to reformulate my question.
Why do you want to rerun recon-all after trac-all? You just need to run it
before trac-all.
On Tue, 5 Feb 2013, std...@virgilio.it wrote:
No, I 'm sorry. I try to reformulate my question.
I have a folder called Diff01 in
my $SUBJECTS_DIR (/Applications/freesurfer/subjects/subject_prova)
Thi
No, I 'm sorry. I try to reformulate my question.
I have a folder called Diff01 in my $SUBJECTS_DIR
(/Applications/freesurfer/subjects/subject_prova)
This folder (Diff01) contains four files: data.nii.gz (DWI), bvecs.txt,
bvals.txt and MPRAGE.nii.gz.
Which is the exact command line (and the exac
