[Freesurfer] ROI Correlations

2021-01-18 Thread Swanson,Clayton
External Email - Use Caution Hi Freesurfer Folks, I am wondering if it is possible to perform an ROI correlation which can then be viewed on the brain similar to whole brain GLM analysis in Freeview. If so, how would I go about performing this type of operation as to specify tha

Re: [Freesurfer] ROI Correlations

2021-01-25 Thread Douglas N. Greve
Sorry, I don't know what you mean. Can you elaborate? On 1/18/2021 11:47 AM, Swanson,Clayton wrote: External Email - Use Caution Hi Freesurfer Folks, I am wondering if it is possible to perform an ROI correlation which can then be viewed on the brain similar to whole brain GLM analysi

Re: [Freesurfer] ROI Correlations

2021-01-26 Thread Swanson,Clayton
External Email - Use Caution Hi Doug, Thanks for getting back to me and sorry for not being more clear. I am trying to associate TMS related inhibitory measures to the left pre- and paracentral gyrus thickness for two different groups (healthy, MS). Additionally, I am intereste

Re: [Freesurfer] ROI Correlations

2021-01-26 Thread Douglas N. Greve
The only thing I have that I think will do what you want is a matlab script (annotval2surfoverlay.m, attached); copy it to $FREESURFER/matlab There is documentation in the file on how to run it. Can you look at that and see if you can make it work? On 1/26/2021 9:39 AM, Swanson,Clayton wrote:

Re: [Freesurfer] ROI Correlations

2021-01-26 Thread Swanson,Clayton
External Email - Use Caution Thanks, I will let you know if I can make it work. On Jan 26, 2021, at 8:25 AM, Douglas N. Greve mailto:dgr...@mgh.harvard.edu>> wrote: The only thing I have that I think will do what you want is a matlab script (annotval2surfoverlay.m, attached); c