Re: [Freesurfer] Recon error: Talairach Failure Detection

2009-12-14 Thread Douglas N Greve
Hi Rodrigo, first check the talairach registration to see whether it really failed or not -- the automatic checker is often a bit conservative. If it did, then you can fix it by hand. If it did not, then you can re-run recon-all with -notal-check. doug Rodrigo Zepeda wrote: > Hi, > > I'm getti

[Freesurfer] Recon error: Talairach Failure Detection

2009-12-14 Thread Rodrigo Zepeda
Hi, I'm getting an error trying to run a reconstruction. I'm working on multnomah and my subjects directory is: /autofs/space/multnomah_002/users/Cashlab/ *I'm using the following command:* [multnomah:Cashlab] (nmr-std-env) recon-all -autorecon1 -autorecon2 -subject MG15_SurferOutput -i MG15/MG