[Freesurfer] Reg: Correcting Defect error

2016-03-19 Thread Jesu Kiran Jk
Dear Freesurfer experts, I have been running freesurfer for a patient data, and have to find this retesselalation of defect. I have successful with some data but for some others it looks frozen even after 7 days. Would it be possible to please have a look and help me out? Also, how could I pass

Re: [Freesurfer] Reg: Correcting Defect error

2016-03-18 Thread Bruce Fischl
Hi Jesu you could upload the subject, but it is almost certainly the case that you have some huge defect that represents a big error, like the skull or cerebellum being attached to the surface. Look at the ?h.inflated.nofix or ?h.orig.nofix to see what is going on. If you can't figure it out