Re: [Freesurfer] Registration: Variable Must Begin with a Letter Error

2017-01-27 Thread dgw
Hi Anderson, Please supply the command input and the error as well as the previous correspondence. Thanks d Sent from my Phone > On Jan 26, 2017, at 16:10, Anderson Napolitano > wrote: > > ​Thank you Dr. Greve and Don. Unfortunately adding '\' after spaces and

Re: [Freesurfer] Registration: Variable Must Begin with a Letter Error

2017-01-26 Thread Douglas N Greve
hi, please include previous correspondence so that we know what you are referring to On 01/26/2017 04:10 PM, Anderson Napolitano wrote: > ​Thank you Dr. Greve and Don. Unfortunately adding '\' after spaces > and removing the spaces all together doesn't seem to resolve the said > error. > > >

[Freesurfer] Registration: Variable Must Begin with a Letter Error

2017-01-26 Thread Anderson Napolitano
?Thank you Dr. Greve and Don. Unfortunately adding '\' after spaces and removing the spaces all together doesn't seem to resolve the said error. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

Re: [Freesurfer] Registration: Variable Must Begin with a Letter Error

2017-01-25 Thread Krieger, Donald N.
> Sent: Wednesday, January 25, 2017 4:53 PM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] Registration: Variable Must Begin with a Letter > Error > > > In the terminal output it says that your movable volume is > > > /Users/djsandoval/Desktop/Se

Re: [Freesurfer] Registration: Variable Must Begin with a Letter Error

2017-01-25 Thread Douglas N Greve
In the terminal output it says that your movable volume is /Users/djsandoval/Desktop/Selwyn/M87127996-2016004/Baseline/PETCT/PET/PET BRAIN TOF STATIC 2/2016004A/IM-0001-0001.dcm not template.nii.gz. In principle, that should be fine, except that there are spaces in the path On 01/25/2017

[Freesurfer] Registration: Variable Must Begin with a Letter Error

2017-01-25 Thread Anderson Napolitano
Hello Experts! I am having trouble checking the registration per step 2 of the pet surfer tutorial: http://freesurfer.net/fswiki/PetSurfer. The line: mri_coreg --s subject --mov template.nii.gz --reg template.reg.lta worked just fine but when checking the registration using the line: