Re: [Freesurfer] Running qcache on old FS data

2018-06-18 Thread Douglas N. Greve
Sorry, I don't know what the problem is and I am not highly motivated to debug a 10-year-old version of FS. Instead of using qdec, why not just use the command-line stream (ie, mris_preproc, mri_surf2surf, mri_glmfit, and mri_glmfit-sim). There are tutorials for it on the wiki. We are also gett

Re: [Freesurfer] Running qcache on old FS data

2018-06-18 Thread Jamie Hanson
External Email - Use Caution I installed Freesurfer v.4.5 and tried to qcache this old data, but ran into an error (segmentation fault). I wondered if there were some settings or files I might be missing? (Or if I had old libraries that stopped FS from completing?) I downloaded fr

Re: [Freesurfer] Running qcache on old FS data

2018-06-14 Thread Jamie Hanson
External Email - Use Caution I tried that, but no luck. FS ran into issues with ?h.white.H and then ?h.w-g.pct.mgh (maybe more errors). Is there a way to use qcache in 4.5? Could I simply download and install v.4.5 ( https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/4.5.0/) an

Re: [Freesurfer] Running qcache on old FS data

2018-06-13 Thread Douglas N. Greve
I have no idea how to make it work with data that old. You can "fool" it by copying or soft linking lh.curv to lh.white.K. You can probably get it to at least finish. On 06/06/2018 03:41 PM, Jamie Hanson wrote: > > External Email - Use Caution > > > Hello all, > > I was trying to run qc

[Freesurfer] Running qcache on old FS data

2018-06-06 Thread Jamie Hanson
External Email - Use Caution Hello all, I was trying to run qcache on some previously processed Freesurfer data from a colleague, but ran into some issues with missing files and wondered how best to proceed. Details: -The data was processed with (Freesurfer) v4.5.0 and I would id