Re: [Freesurfer] SNR for PET images

2018-08-14 Thread James Brown
External Email - Use Caution Hi Doug, thank you for the response. I would appreciate if you advice any better method to compute the SNR for PET signal within an ROI (e..g. thalamus)? I used spmregister to move my PET images to Freesurfer space then I am thinking of using mri_segs

Re: [Freesurfer] SNR for PET images

2018-08-14 Thread Douglas N. Greve
Yes, but know that the "SNR" as computed there is the spatial mean divided by the spatial standard dev. This is likely not the SNR that you want On 08/14/2018 05:07 PM, James Brown wrote: > > External Email - Use Caution > > Hi Freesurfer team, > I would like to use "mri_segstat" to comp

[Freesurfer] SNR for PET images

2018-08-14 Thread James Brown
External Email - Use Caution Hi Freesurfer team, I would like to use "mri_segstat" to compute SNR for regions of interest. My question is, if I use PET images as input does this mean that SNR will be computed for the PET signal in the ROIs? Thanks for any help John__