[Freesurfer] Sag T1 3D post-contrast

2018-07-31 Thread John Absher
External Email - Use Caution Has anyone else tried to do recon-all with Sagittal 3D T1 post-contrast volumes? We're getting hung in recon-all at the Talairach registration step, and I wonder if the vascular enhancement at the pial surface might be throwing the algorithm off. Abo

Re: [Freesurfer] Sag T1 3D post-contrast

2018-08-01 Thread Bruce Fischl
Hi John I've pushed a lot of post-contrast scans through and haven't had many issues. Have you checked the talairach? If you upload the dataset we will take a look cheers Bruce On Wed, 1 Aug 2018, John Absher wrote: External Email - Use Caution Has anyone else tried to do