Re: [Freesurfer] Surface maps of cortical thickness

2019-01-22 Thread Greve, Douglas N.,Ph.D.
Use mri_concat avg-lh-thickness.15.mgh --std --o avg-lh-thickness.15.std.mgh You can compute mean with --mean instead of --std On 1/9/19 9:19 AM, Schranzer René wrote: > > External Email - Use Caution > > Hello everyone, > > I have some problems with the computation of the SD of thickness

[Freesurfer] Surface maps of cortical thickness

2019-01-09 Thread Schranzer René
External Email - Use Caution Hello everyone, I have some problems with the computation of the SD of thickness maps (mgh file) of 10 subjects. First I computed the average thickness map (to fsaverage) with the command: mris_preproc --fsgd qdec/subject_list.fsgd --target fsaverage