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Subject: [Freesurfer] TRACULA - input Nifti instead of DICOM?
External Email - Use Caution
Hello Anastasia,
I am following up on my previous email about running TRACULA on my subject's
NIFTI DWI images instead of dicoms and am running into the following issues
which I have had
External Email - Use Caution
Hello Anastasia,
I am following up on my previous email about running TRACULA on my
subject's NIFTI DWI images instead of dicoms and am running into the
following issues which I have had before when trying to use NIFTI files
instead of dicoms.
Too
To: Freesurfer support list
Subject: Re: [Freesurfer] TRACULA - input Nifti instead of DICOM?
External Email - Use Caution
Gotcha. I was wondering if it would be possible to extract the bvecs and bval
files directly from the Nifti file, however, it seems like based on the
documentation
*From:* freesurfer-boun...@nmr.mgh.harvard.edu <
> freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Daniel Callow <
> ddcc2...@gmail.com>
> *Sent:* Friday, September 27, 2019 10:31:19 AM
> *To:* Freesurfer support list
> *Subject:* [Freesurfer] TRACULA - input Nifti instead of DICOM?
&
Callow
Sent: Friday, September 27, 2019 10:31:19 AM
To: Freesurfer support list
Subject: [Freesurfer] TRACULA - input Nifti instead of DICOM?
External Email - Use Caution
Hello I was given a dataset already in Nifti format that I would like to run
Tracula on. Is it possible to input
External Email - Use Caution
Hello I was given a dataset already in Nifti format that I would like to
run Tracula on. Is it possible to input Nifti files in the config file
instead of DICOMs? How would this work?
Best,
Daniel Callow
--
*Daniel Callow*
*PhD Student, Neuroscience
