[Freesurfer] Tetrahedral mesh

2022-12-20 Thread Donatas Sederevičius
External Email - Use Caution Hi, is there a tool to make a tetrahedral mesh of the brain from the MRI T1w image and/or its whole-brain segmentation? I need it for the finite elements method. -Don ___ Freesurfer mailing list Freesurfer@nm

Re: [Freesurfer] Tetrahedral mesh

2022-12-20 Thread Douglas N. Greve
Why not samseg? On 12/20/2022 12:50 PM, Donatas Sederevičius wrote: External Email - Use Caution Hi, is there a tool to make a tetrahedral mesh of the brain from the MRI T1w image and/or its whole-brain segmentation? I need it for the finite elements method. -Don _

Re: [Freesurfer] Tetrahedral mesh

2022-12-21 Thread Don Se
External Email - Use Caution Ah, I see. However, I would like to get it for brain scans with a pathology (a tumour). 2022-12-21, tr, 05:39 Douglas N. Greve rašė: > Why not samseg? > > On 12/20/2022 12:50 PM, Donatas Sederevičius wrote: > > External Email - Use Caution >

Re: [Freesurfer] Tetrahedral mesh

2022-12-21 Thread Douglas N. Greve
Not sure what it will do then. It will put vertices in that region. When you run samseg, add --save-mesh On 12/21/2022 8:18 AM, Don Se wrote: External Email - Use Caution Ah, I see. However, I would like to get it for brain scans with a pathology (a tumour). 2022-12-21, tr, 05:39 D