Hello Freesurfers,
I'm been experimenting with creating timecourses for tksurfer and
tkmedit using the -hrf flag. However I've noticed that the h.nii files
created provide the HDR timecourse are only based on the original
analysis under which isxconcat-sess was run (in my case, error vs
correc
Do you mean something like you have two conditions (say A and B) and two
groups (say 1 and 2), you want to plot A1 and A2 instead of just A and B?
Adam Nitenson wrote:
> Hello Freesurfers,
>
> I'm been experimenting with creating timecourses for tksurfer and
> tkmedit using the -hrf flag. How
Yes, exactly...and if possible A1, A2, B1, and B2 simultaneously.
-Adam
> Do you mean something like you have two conditions (say A and B) and two
> groups (say 1 and 2), you want to plot A1 and A2 instead of just A and B?
>
> Adam Nitenson wrote:
>> Hello Freesurfers,
>>
>> I'm been experime
Create two contrasts, A-vs-fixation and B-vs-fixation, then run
isxconcat-sess separately for each group. This will create ces files for
each contrast. There will be a ces file for each time point in the FIR;
each of these will have a frame for all the members of the group.
1. Compute the mean
Ok, I have previously created these group specific concatenations, but not
with the -hrf flag. Would I need to reconcatenate them with this flag or
does your method not require it?
-Adam
> Create two contrasts, A-vs-fixation and B-vs-fixation, then run
> isxconcat-sess separately for each group.
The -hrf flag is not necessary.
Adam Nitenson wrote:
> Ok, I have previously created these group specific concatenations, but not
> with the -hrf flag. Would I need to reconcatenate them with this flag or
> does your method not require it?
>
> -Adam
>
>
>> Create two contrasts, A-vs-fixation an
Hey Doug,
Everything is working out well with this pathwaybut beta2sxa is not
recognized as a valid command. I've sourced to nmr (Stable 4 if that
matters at all) and have been on the same terminal on which I've done the
previous steps. Any ideas?
Specifically, I entered:
beta2sxa -b 12ConT.
use stable5
Adam Nitenson wrote:
> Hey Doug,
>
> Everything is working out well with this pathwaybut beta2sxa is not
> recognized as a valid command. I've sourced to nmr (Stable 4 if that
> matters at all) and have been on the same terminal on which I've done the
> previous steps. Any ideas?
>
