[Freesurfer] Tracula/Config file error

2013-07-01 Thread Gundran, Andrew
I have been trying to run tracula with a config file but keep getting the same error message when I use the trac-all command for pre-processing set: Variable name must begin with a letter Its become very annoying. ___ Freesurfer mailing list

[Freesurfer] Tracula/ config file error

2013-07-01 Thread Gundran, Andrew
I have been trying to run tracula with a config file but keep getting the same error message when I use the trac-all command for pre-processing set: Variable name must begin with a letter It has become very, very annoying. PLEASE SOMEONE HELP!!! Andrew -- # FreeSurfer SUBJECTS_DIR #

Re: [Freesurfer] Tracula/ config file error

2013-07-01 Thread Anastasia Yendiki
Hi Andrew - I'm sorry that you're annoyed. I can feel your pain. Take a deep breath and let it all go. More to the point, when I view the text file that you sent, I see that several of the lines are joined together, so both the dcmroot and dcmlist variables appear commented out. Is this

Re: [Freesurfer] Tracula/ config file error

2013-07-01 Thread Anastasia Yendiki
: [Freesurfer] Tracula/ config file error Hi Andrew - I'm sorry that you're annoyed. I can feel your pain. Take a deep breath and let it all go. More to the point, when I view the text file that you sent, I see that several of the lines are joined together, so both the dcmroot and dcmlist variables

Re: [Freesurfer] Tracula/ config file error

2013-07-01 Thread Anastasia Yendiki
[mailto:ayend...@nmr.mgh.harvard.edu] Sent: Monday, July 01, 2013 2:48 PM To: Gundran, Andrew Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula/ config file error Can you see that this is all one line? # Input diffusion DICOMs (file names relative to dcmroot) # If original DICOMs

Re: [Freesurfer] Tracula/ config file error

2013-07-01 Thread Anastasia Yendiki
] Sent: Monday, July 01, 2013 3:09 PM To: Gundran, Andrew Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula/ config file error What program are you viewing it in? If you add a line at the end of config.txt that says echo $dcmlist (without the quotation marks) and then run source