Re: [Freesurfer] Tracula Memory Requirements

2011-10-11 Thread Moiyadi, Ammar
, Ammar Sent: Friday, September 23, 2011 12:31 PM To: Anastasia Yendiki Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula Memory Requirements Hi - The voxel dimensions are 1.0156 x 1.0156 x 2.6 mm in the merged_f1 bedpost output and the total number of voxels

Re: [Freesurfer] Tracula Memory Requirements

2011-10-11 Thread Anastasia Yendiki
Sent: Friday, September 23, 2011 12:31 PM To: Anastasia Yendiki Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula Memory Requirements Hi - The voxel dimensions are 1.0156 x 1.0156 x 2.6 mm in the merged_f1 bedpost output and the total number of voxels in the nodif_brain_mask

Re: [Freesurfer] Tracula Memory Requirements

2011-10-11 Thread Moiyadi, Ammar
: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula Memory Requirements Hi Ammar - You mentioned that you were able to run things fine on another computer with 16 Gb of RAM. How much memory was being utilized on that computer by these processes (dmri_train and dmri_paths)? a.y On Tue, 11

[Freesurfer] Tracula Memory Requirements

2011-09-23 Thread Moiyadi, Ammar
Hi Freesurfers, I've been getting a memory allocation error (below) when running trac prep and trac paths on my computer with 6 gb ram. Since I was able to run these steps on a computer with 16 gb, I want to know, what is the minimum memory requirement for running tracula? Is the memory

Re: [Freesurfer] Tracula Memory Requirements

2011-09-23 Thread Anastasia Yendiki
Hi Ammar - Are these macos or linux machines and what is the size of your diffusion images? a.y On Fri, 23 Sep 2011, Moiyadi, Ammar wrote: Hi Freesurfers, I've been getting a memory allocation error (below) when running trac prep and trac paths on my computer with 6 gb ram. Since I was

Re: [Freesurfer] Tracula Memory Requirements

2011-09-23 Thread Moiyadi, Ammar
@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Tracula Memory Requirements Hi Ammar - Are these macos or linux machines and what is the size of your diffusion images? a.y On Fri, 23 Sep 2011, Moiyadi, Ammar wrote: Hi Freesurfers, I've been getting a memory allocation error (below) when running

Re: [Freesurfer] Tracula Memory Requirements

2011-09-23 Thread Anastasia Yendiki
23, 2011 10:30 AM To: Moiyadi, Ammar Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Tracula Memory Requirements Hi Ammar - Are these macos or linux machines and what is the size of your diffusion images? a.y On Fri, 23 Sep 2011, Moiyadi, Ammar wrote: Hi Freesurfers, I've

Re: [Freesurfer] Tracula Memory Requirements

2011-09-23 Thread Moiyadi, Ammar
AM To: Moiyadi, Ammar Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula Memory Requirements Hi Ammar - Can you check the voxel dimensions of one of the merged_* files in the bedpost directory, and also how many voxels are included in the mask that was used for bedpost? It seems

Re: [Freesurfer] Tracula Memory Requirements

2011-09-23 Thread Anastasia Yendiki
From: Anastasia Yendiki [ayend...@nmr.mgh.harvard.edu] Sent: Friday, September 23, 2011 11:41 AM To: Moiyadi, Ammar Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] Tracula Memory Requirements Hi Ammar - Can you check the voxel dimensions of one