Re: [Freesurfer] Two Different T1 Acquisition Planes as recon-all Inputs

2016-04-25 Thread Bruce Fischl
Hi Doug two aren't necessarily better than one. It depends on your coil/field strength and amount of motion. In particular, a coronal and a sagittal will have differential distortions that will blur the average. It might still help if your data is noisy - it's hard to say a priori, but

[Freesurfer] Two Different T1 Acquisition Planes as recon-all Inputs

2016-04-25 Thread Douglas Merkitch
Hello Freesurfer experts, We currently acquire two sagittal T1s (136 slices) in our protocol so that we can take advantage of freesurfer's motion correction algorithm; however, we would like to add a coronal T1 (196 slices). In order to cut down on scan time, we are also considering dropping