: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Bruce Fischl
<fis...@nmr.mgh.harvard.edu>
Sent: 15 June 2017 17:03:19
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
I mean the /surf/lh.pial path has to be wrong, as
<fis...@nmr.mgh.harvard.edu>
Sent: 15 June 2017 17:03:19
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
I mean the /surf/lh.pial path has to be wrong, as that points to the root
where you wouldn't be allowed to put data. I guess surf/ worked for you,
but would only work
edu> on behalf of Bruce Fischl
<fis...@nmr.mgh.harvard.edu>
Sent: 15 June 2017 16:11:53
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
Hi Michael
I think you need to do a Unix tutorial. That path is wrong.
cheers
Bruce
On Thu, 15 Jun
2017, Michael Davies wrote:
gt;
Sent: 15 June 2017 16:11:53
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
Hi Michael
I think you need to do a Unix tutorial. That path is wrong.
cheers
Bruce
On Thu, 15 Jun
2017, Michael Davies wrote:
>
> Hi Bruce, i'm getting closer to opening it now. But
21
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
you are not calling freeview in this command. Try putting freeview at the
start
On Thu, 15 Jun 2017, Michael Davies wrote:
>
> Hi Bruce, i am still getting error messages. is there anything else i
could
> try doin
: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] viewing 3D surfaces
Remove the '/' in front of "surf".
On 06/15/2017 11:45 AM, Michael Davies wrote:
Hi Bruce, i'm getting closer to opening it now. But the final command
/surf/lh.pial \ didnt work this time. Any further sugge
edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Bruce Fischl
<fis...@nmr.mgh.harvard.edu>
Sent: 15 June 2017 15:19:21
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
you are not calling freeview in this command. Try putting freeview at the
start
On Thu, 15 Jun 20
__
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Bruce Fischl
<fis...@nmr.mgh.harvard.edu>
Sent: 15 June 2017 14:11
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
Hi Michael
you need to have FreeSur
u>
Sent: 15 June 2017 14:11
To: Freesurfer support list
Subject: Re: [Freesurfer] viewing 3D surfaces
Hi Michael
you need to have FreeSurfer in your path or nothing will work. Have you
sourced the FreeSurferEnv.sh file? Have you set FREESURFER_HOME in the
environment?
cheers
Bruce
On Thu, 15 Jun 2017,
Hi Michael
you need to have FreeSurfer in your path or nothing will work. Have you
sourced the FreeSurferEnv.sh file? Have you set FREESURFER_HOME in the
environment?
cheers
Bruce
On Thu, 15 Jun 2017, Michael Davies wrote:
> Hello, i am having problems accessing the 3D surfaces of my data.
Hello, i am having problems loading the 3D surface for my data. I was wondering
if you could provide any advice please? This is the command code i put into the
terminal;
bash-4.1$ freeview
Hello, i am having problems accessing the 3D surfaces of my data. Is there any
advice you could provide for me please?
bash-4.1$ freeview -f \
> /projects/pbic1030/Michael/subjects/Subj1/fsaverage/surf/lh.pial:annot=aparc.annot:name=pial_aparc:visible=0
> \
>
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