Re: [Freesurfer] WM Parcellation - lobe mapping

2011-09-07 Thread Douglas N Greve
You can do this in a couple of steps. First, you'll need to create a lobe annotation. You can do this in 3 ways: 1. mri_annotation2label --lobesStrict 2. mri_annotation2label --lobes 3. Custom: break up annotation and recombine: a. mri_annotation to create separate label files

[Freesurfer] WM Parcellation - lobe mapping

2011-09-02 Thread Brainiac .
Hi All, I need to classify WM into different lobes (temporal, parietal, frontal, occipital). I tried to do the lobe mapping using parcellations from wmparc.mgz. http://surfer.nmr.mgh.harvard.edu/fswiki/CorticalParcellation My problem is the "unsegmented white matter" in wmparc.mgz. My understandi