Re: [Freesurfer] WM error near the right putamen

2022-04-01 Thread Gabor Perlaki
External Email - Use Caution Dear Freesurfer experts, Sorry to post this issue again, but I'm not sure how to move forward with my data. I'd really appreciate any answer, because I'm under a lot of pressure. Using FS 7.1.0 I found inaccuracy of the WM surface near the putamen and

Re: [Freesurfer] WM error near the right putamen

2022-03-28 Thread Gabor Perlaki
External Email - Use Caution Can you please help me with which measures are not valid in this case? Are the cortical (e.g. thickness of ctx-rh-medialorbitofrontal) and subcortical measures (e.g. right pallidum) both invalid? aseg.mgz looks nice and aseg+aparc.mgz looks also nice. O

Re: [Freesurfer] WM error near the right putamen

2022-03-27 Thread Douglas N. Greve
This is actually a bug in version 7.[012]. This area is probably not valid anyway. We'll have a fix in 7.3 On 3/21/2022 7:31 PM, Gabor Perlaki wrote: External Email - Use Caution Dear all, fswiki suggests that " There are regions where the surfaces are not intended to be accurate th

Re: [Freesurfer] WM error near the right putamen

2022-03-26 Thread Gabor Perlaki
External Email - Use Caution Could anybody please help me with this? Gabor Perlaki ezt írta (időpont: 2022. márc. 22., K, 0:31): > Dear all, > > fswiki suggests that " There are regions where the surfaces are not > intended to be accurate that you should be aware of: Areas aroun

[Freesurfer] WM error near the right putamen

2022-03-21 Thread Gabor Perlaki
External Email - Use Caution Dear all, fswiki suggests that " There are regions where the surfaces are not intended to be accurate that you should be aware of: Areas around the hippocampus and amygdala. " I also found inaccuracy of the WM surface near the putamen and accumbens re