If you just need the aseg in nii.gz format, then you can
mri_convert aseg.mgz aseg.nii.gz
If you need a particular seg in its own file, then you can
mri_binarize --i aseg.mgz --match 17 --o left-hippo.nii.gz
where 17 is from $FREESURFER_HOME/FreeSurferColorLUT.txt
On 5/2/18 5:47 AM, Otília w
External Email - Use Caution
Hi to all FS users!
Sorry in advance if I'm _cross-posting_ but
after searching and trying some stuff I still can't figure out how to do
this.
After all the processing in FS I would like to evaluate the
labels (from each participant) in other softw
