Re: [Freesurfer] aseg.stats file

2008-08-14 Thread Pedro Paulo de Magalhães Oliveira Junior
Irene, Have you checked if these patients who don`t have aseg.stats in their stats directory have the recon-all finished correctly. Best Regards Pedro Paulo Jr 2008/8/14 irene <[EMAIL PROTECTED]> > Hi all, > > I need data which are in the aseg.stats file (which is in the stats file). > Some pa

[Freesurfer] aseg.stats file

2008-08-14 Thread irene
Hi all, I need data which are in the aseg.stats file (which is in the stats file). Some patients haven't the aseg.stats file in the stats file, so does somebody know where I can find the aseg.stats file? Thanks Irene Mattisi Multiple Sclerosis Centre of Padova, Italy ___

Re: [Freesurfer] Aseg.stats file

2008-01-30 Thread Jared Conley
Thanks. That seemed to work just fine. Jared Bruce Fischl wrote: I think recon-all -subjid -segstats should do itOn Wed, 30 Jan 2008, Jared Conley wrote: FreeSurfer Community, Is there an easy, quick way to regenerate the aseg.stats file? This particular file was deleted accidentally

Re: [Freesurfer] Aseg.stats file

2008-01-30 Thread Allison Stevens
Jared, You can do recon-all -segstats for each subject. This uses the aseg.mgz to create the aseg.stats, however, if the new aseg.mgz you generated with the script I sent you is named something other than aseg.mgz, then you will want to change it to aseg.mgz for this to work. Allison On We

[Freesurfer] Aseg.stats file

2008-01-30 Thread Jared Conley
FreeSurfer Community, Is there an easy, quick way to regenerate the aseg.stats file? This particular file was deleted accidentally for a few subjects and we wondered if we could quickly recreate this file without having to run recon-all again. All the other files in the subject directory are

Re: [Freesurfer] Aseg.stats file

2008-01-30 Thread Bruce Fischl
I think recon-all -subjid -segstats should do itOn Wed, 30 Jan 2008, Jared Conley wrote: FreeSurfer Community, Is there an easy, quick way to regenerate the aseg.stats file? This particular file was deleted accidentally for a few subjects and we wondered if we could quickly recreate this